Ali Khan

Current Funding

NSERC Masters Post-graduate Scholarship

Research Projects

Quantifying neuro-degeneration of the Basal Ganglia in Huntington's Disease
Large Deformation Metric Mapping Tools for Non Rigid Registration
Symmetric Large-Deformation Registration
FreeSurfer-Initiated Putamen, Cadate and Thalamus Segmentation in MRI Using Large Deformation Diffeomorphic Metric Mapping

Selected Publications

Semi-automated Basal Ganglia Segmentation Using Large Deformation Diffeomorphic Metric Mapping
October 30, 2005
Ali Khan, Elizabeth Aylward, Patrick Barta, Michael I. Miller, Mirza Faisal Beg: Semi-automated Basal Ganglia Segmentation Using Large Deformation Diffeomorphic Metric Mapping. MICCAI 2005: 238-245

Computing an average anatomical atlas using LDDMM and geodesic shooting
April 9, 2006
Mirza Faisal Beg, Ali Khan: Computing an average anatomical atlas using LDDMM and geodesic shooting. ISBI 2006: 1116-1119

Symmetric Data Attachment Terms for Large Deformation Image Registration
September 1, 2007
Beg, M. F.; Khan, A., "Symmetric Data Attachment Terms for Large Deformation Image Registration," Medical Imaging, IEEE Transactions on , vol.26, no.9, pp.1179-1189, Sept. 2007

FreeSurfer-initiated fully-automated subcortical brain segmentation in MRI using Large Deformation Diffeomorphic Metric Mapping
March 17, 2008
Ali R Khan and Lei Wang and Mirza Faisal Beg, FreeSurfer-initiated fully-automated subcortical brain segmentation in MRI using Large Deformation Diffeomorphic Metric Mapping, Neuroimage, 2008, Vol. 41, pp. 735--46

Representation of time-varying shapes in the large deformation diffeomorphic framework
January 1, 2008
AR Khan and MF Beg, Representation of time-varying shapes in the large deformation diffeomorphic framework, 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro 2008. ISBI 2008, 2008, pp. 1521--1524

Fully-Automated Multi-Stage Hippocampus Mapping in Very Mild Alzheimer Disease
January 1, 2008
L Wang and A Khan and JG Csernansky and Bruce Fischl and MI Miller and JC Morris and MF Beg, Fully-Automated Multi-Stage Hippocampus Mapping in Very Mild Alzheimer Disease, MICCAI 2008 Workshop on Computational Anatomy and Physiology of the Hippocampus (CAPH 08), 2008, pp. 22--34